Supplementary information for the article: Kosanović, D.; Dyas, M.; Grogan, H.; Kavanagh, K. Differential Proteomic Response of Agaricus Bisporus and Trichoderma Aggressivum f. Europaeum to Bacillus Velezensis Supernatant. European Journal of Plant Pathology 2021, 160 (2). https://doi.org/10.1007/s10658-021-02252-5.
Skup podataka (Objavljena verzija)
Metapodaci
Prikaz svih podataka o dokumentuApstrakt
Table S1. Bacterial species used in this study with amplicon deposition number obtained from NCBI GeneBank; Figure S1. 16S rRNA gene analysis; Figure S2. Specific protein analysis- gyrB gene analysis; Figure S3a. Zone of inhibition test on NA plates104 T. aggressivum conidia per plate vs 10 μl of bacterial overnight culture incubated on 30°C; Figure S3b. Zone of inhibition test on YMEA and NA plates 104 T. aggressivum conidia per plate vs 10 μl of bacterial overnight culture incubated on 25°C; Figure S4. The effect of 25%v/v bacterial supernatants on T. aggressivum growth was assessed. B. subtilis R8.3 supernatant was found to inhibit growth of T. aggressivum by 37% and that was the maximum effect compared to other bacterial supernatants; Figure S5. PCA analysis. □ - Control group and ∆ - T. aggresivum + B. velezensis SN group; Figure S6. Protein abundance similarities of two sample group (T. aggressivum control and T. aggressivum treated with B. velezensis SN) based on hierarchical cl...ustering; Figure S7; Figure S8. PCA analysis. □ - Control group and ∆ - A. bisporus + B. velezensis SN group.
Ključne reči:
Agaricus bisporus / Trichoderma aggressivum / Bacillus velezensis / ProteomicsIzvor:
European Journal of Plant Pathology, 2021, 160, 2Izdavač:
- Springer
Finansiranje / projekti:
- Irish Research Council, GOIPD/2018/115
- Q-Exactive mass spectrometer was funded under the SFI Research Infrastructure Call 2012
- Grant Number: 12/RI/2346
Napomena:
- Related to the published version: https://intor.torlakinstitut.com/handle/123456789/613
- Supplementary material for: https://doi.org/10.1007/s10658-021-02252-5
Povezane informacije:
- Povezani sadržaj
https://doi.org/10.1007/s10658-021-02252-5 - Povezani sadržaj
https://intor.torlakinstitut.com/handle/123456789/613
Institucija/grupa
TorlakTY - DATA AU - Kosanović, Dejana AU - Dyas, Maria AU - Grogan, Helen AU - Kavanagh, Kevin PY - 2021 UR - http://intor.torlakinstitut.com/handle/123456789/638 AB - Table S1. Bacterial species used in this study with amplicon deposition number obtained from NCBI GeneBank; Figure S1. 16S rRNA gene analysis; Figure S2. Specific protein analysis- gyrB gene analysis; Figure S3a. Zone of inhibition test on NA plates104 T. aggressivum conidia per plate vs 10 μl of bacterial overnight culture incubated on 30°C; Figure S3b. Zone of inhibition test on YMEA and NA plates 104 T. aggressivum conidia per plate vs 10 μl of bacterial overnight culture incubated on 25°C; Figure S4. The effect of 25%v/v bacterial supernatants on T. aggressivum growth was assessed. B. subtilis R8.3 supernatant was found to inhibit growth of T. aggressivum by 37% and that was the maximum effect compared to other bacterial supernatants; Figure S5. PCA analysis. □ - Control group and ∆ - T. aggresivum + B. velezensis SN group; Figure S6. Protein abundance similarities of two sample group (T. aggressivum control and T. aggressivum treated with B. velezensis SN) based on hierarchical clustering; Figure S7; Figure S8. PCA analysis. □ - Control group and ∆ - A. bisporus + B. velezensis SN group. PB - Springer T2 - European Journal of Plant Pathology T1 - Supplementary information for the article: Kosanović, D.; Dyas, M.; Grogan, H.; Kavanagh, K. Differential Proteomic Response of Agaricus Bisporus and Trichoderma Aggressivum f. Europaeum to Bacillus Velezensis Supernatant. European Journal of Plant Pathology 2021, 160 (2). https://doi.org/10.1007/s10658-021-02252-5. IS - 2 VL - 160 VL - 397 UR - https://hdl.handle.net/21.15107/rcub_intor_638 ER -
@misc{ author = "Kosanović, Dejana and Dyas, Maria and Grogan, Helen and Kavanagh, Kevin", year = "2021", abstract = "Table S1. Bacterial species used in this study with amplicon deposition number obtained from NCBI GeneBank; Figure S1. 16S rRNA gene analysis; Figure S2. Specific protein analysis- gyrB gene analysis; Figure S3a. Zone of inhibition test on NA plates104 T. aggressivum conidia per plate vs 10 μl of bacterial overnight culture incubated on 30°C; Figure S3b. Zone of inhibition test on YMEA and NA plates 104 T. aggressivum conidia per plate vs 10 μl of bacterial overnight culture incubated on 25°C; Figure S4. The effect of 25%v/v bacterial supernatants on T. aggressivum growth was assessed. B. subtilis R8.3 supernatant was found to inhibit growth of T. aggressivum by 37% and that was the maximum effect compared to other bacterial supernatants; Figure S5. PCA analysis. □ - Control group and ∆ - T. aggresivum + B. velezensis SN group; Figure S6. Protein abundance similarities of two sample group (T. aggressivum control and T. aggressivum treated with B. velezensis SN) based on hierarchical clustering; Figure S7; Figure S8. PCA analysis. □ - Control group and ∆ - A. bisporus + B. velezensis SN group.", publisher = "Springer", journal = "European Journal of Plant Pathology", title = "Supplementary information for the article: Kosanović, D.; Dyas, M.; Grogan, H.; Kavanagh, K. Differential Proteomic Response of Agaricus Bisporus and Trichoderma Aggressivum f. Europaeum to Bacillus Velezensis Supernatant. European Journal of Plant Pathology 2021, 160 (2). https://doi.org/10.1007/s10658-021-02252-5.", number = "2", volume = "160, 397", url = "https://hdl.handle.net/21.15107/rcub_intor_638" }
Kosanović, D., Dyas, M., Grogan, H.,& Kavanagh, K.. (2021). Supplementary information for the article: Kosanović, D.; Dyas, M.; Grogan, H.; Kavanagh, K. Differential Proteomic Response of Agaricus Bisporus and Trichoderma Aggressivum f. Europaeum to Bacillus Velezensis Supernatant. European Journal of Plant Pathology 2021, 160 (2). https://doi.org/10.1007/s10658-021-02252-5.. in European Journal of Plant Pathology Springer., 160(2). https://hdl.handle.net/21.15107/rcub_intor_638
Kosanović D, Dyas M, Grogan H, Kavanagh K. Supplementary information for the article: Kosanović, D.; Dyas, M.; Grogan, H.; Kavanagh, K. Differential Proteomic Response of Agaricus Bisporus and Trichoderma Aggressivum f. Europaeum to Bacillus Velezensis Supernatant. European Journal of Plant Pathology 2021, 160 (2). https://doi.org/10.1007/s10658-021-02252-5.. in European Journal of Plant Pathology. 2021;160(2). https://hdl.handle.net/21.15107/rcub_intor_638 .
Kosanović, Dejana, Dyas, Maria, Grogan, Helen, Kavanagh, Kevin, "Supplementary information for the article: Kosanović, D.; Dyas, M.; Grogan, H.; Kavanagh, K. Differential Proteomic Response of Agaricus Bisporus and Trichoderma Aggressivum f. Europaeum to Bacillus Velezensis Supernatant. European Journal of Plant Pathology 2021, 160 (2). https://doi.org/10.1007/s10658-021-02252-5." in European Journal of Plant Pathology, 160, no. 2 (2021), https://hdl.handle.net/21.15107/rcub_intor_638 .